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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015797989.1_cds_XP_016457821.1_5114
CDS Infomation

[gene=LOC107781597] [db_xref=GeneID:107781597] [protein=sodium transporter HKT1-like] [protein_id=XP_016457821.1] [location=complement(join(56498..56696,57523..57753,60318..61447))] [gbkey=CDS]
Sequence

ATGAAAATGAAGCTGTTTTCGTCATCTTACGGTCAAGGTTTTTTCTTCTCTATCTTTCAT
ATTCTTAATCTTGGCGTAAAGCCATTTTGGATTGAATTAAGTTATTTCATGATCCTTTCA
TTGTTAGGTTTCTTAGCTTTGACTGTCTCAAAACCTAGAACTCTACCATCATTTAGGCCT
CAAAACCTAGATGTGTTTTTCACTTCTGTTTCTGCTGCCACAGTTTCTAGCATGTCCACT
GTTGAAATGGAGGTTTTCTCAAATGCCCAACTTGTCTTCATAACCATATTAATGTTTCTT
GGTGGGGAGGCTTTTACCTCTTTTCTTAGACTTCAACTCATGAAGTCCAAAATTTCCACG
GAAAAAGCGGTTTTACAAAACAAAATTGAATCTTCAAACTCTACTAGGAACTCTATCCAT
CATCTTGAGCAAGGACATGGAAAAGAGGATAATAATTTAGAACATGCAATAATCAATTCT
ATGGAGGACAGTGAGGCAATAGTCAAATTGAAGTCTTTAAGATTCTTGAGTTATGTGGTT
TTTGGTTATATTCTATGCGTTGTTGTTGTTGGTTCTTCCTTAGTTTCTATCTACATAAGC
ATTATTCCAAGTGCAAAACAAGTTCTCATAGAAAAAGGGCTTAACTTGCATACTTTTTCC
CTCTTCACCACAGTTTCAACATTTGCAAATTGTGGTCTTGTCCCTACAAATGAAAACATG
ATGGTATTCAAGAAAAATTCAGGCCTTCTTCTCATTCTTATACCTCAAATCCTTTTGGGA
AACACATTGTATGCTCCTTGCTTACGCCTCGCTATTTGGTTTCTTTGGAAAATCACGAAG
AGAGGAGAGTTTGAGTATATCATGAAGAACTCAAAACGAGTAGGATACTCCCATATTTTT
CCAAATTTGGAAACCATGGCTATTTTAACTACTGTTCTGGGATTCATATCCATTCAGTTT
GTTGTCTTTTGTTCATTGGAATGGAATTCTGAAGCCATTGCTGGAATGAGTTCTTATGAG
AAGCTGGTCGGAGCATTGTTTGAAGTTGTGAATACAAGGCATACTGGTGAATCTGTCTTC
GATCTTTCAACCCTTACTCCAGCTGTCTTAGTATTATTCGCTTTAATGATGTATCTATCA
TCCTATACTTCTTTTTTGCCAGTTGATAGTAATGAAGAGTGCTTGGAAACTACAGAAAGA
ATGAACAGGAGAAAAGGGAGCAGCTTAGTGGAGTACATATCATTCTCACAGCTTAATTAT
TTGGTCATTTTCACCATTCTTATTTGTATTACAGAGAGAGACAAAATGAAAAATGATCCC
CTCAATTTCAATGTACTCAGCATCGTCTTTGAAGTCATCAGTGCATATGGGACTGTCGGA
ATGTCAATGGGCTATAGTTGTGCAAGGCAATTAAAACCAGATCACCATTGCAAGGATGCA
GCATATGGATTTGCTGGAAAATGGAGTAATATGGGAAAGTTCATTCTGATTATTGTCATG
TTTTTTGGAAGGCTGAAGCAGTACAGTAAAAGAGGTGGCAAGGGTTGGAAAGTATTATAA

Peptide Sequence

PEP ID

XP_016457821.1
PEP Infomation

PREDICTED: sodium transporter HKT1-like [Nicotiana tabacum]
Sequence

MKMKLFSSSYGQGFFFSIFHILNLGVKPFWIELSYFMILSLLGFLALTVSKPRTLPSFRP
QNLDVFFTSVSAATVSSMSTVEMEVFSNAQLVFITILMFLGGEAFTSFLRLQLMKSKIST
EKAVLQNKIESSNSTRNSIHHLEQGHGKEDNNLEHAIINSMEDSEAIVKLKSLRFLSYVV
FGYILCVVVVGSSLVSIYISIIPSAKQVLIEKGLNLHTFSLFTTVSTFANCGLVPTNENM
MVFKKNSGLLLILIPQILLGNTLYAPCLRLAIWFLWKITKRGEFEYIMKNSKRVGYSHIF
PNLETMAILTTVLGFISIQFVVFCSLEWNSEAIAGMSSYEKLVGALFEVVNTRHTGESVF
DLSTLTPAVLVLFALMMYLSSYTSFLPVDSNEECLETTERMNRRKGSSLVEYISFSQLNY
LVIFTILICITERDKMKNDPLNFNVLSIVFEVISAYGTVGMSMGYSCARQLKPDHHCKDA
AYGFAGKWSNMGKFILIIVMFFGRLKQYSKRGGKGWKVL

Transcript Sequence

Gene sequence data has not been registered.